########################################
# Program: needle
# Rundate: Wed 13 Jun 2018 09:45:25
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/negativedb/seqid30_low85/sp_Q9AIV3_MPRF_STAAU_4v36_A/needle.txt
#    -asequence /Users/teresatavella/Documents/negativedb/seqid30_low85/sp_Q9AIV3_MPRF_STAAU_4v36_A/sp_Q9AIV3_MPRF_STAAU_Phosphatidylglycerol_lysyltransferase_OS_Staphylococcus_aureus_OX_1280_GN_mprF_PE_3_SV_1.fa
#    -bsequence /Users/teresatavella/Documents/negativedb/seqid30_low85/sp_Q9AIV3_MPRF_STAAU_4v36_A/4v36_A.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/negativedb/seqid30_low85/sp_Q9AIV3_MPRF_STAAU_4v36_A/needle.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: sp_Q9AIV3_MPRF_STAAU_Phosphatidylglycerol_lysyltransferase_OS_Staphylococcus_aureus_OX_1280_GN_mprF_PE_3_SV_1
# 2: 4v36_A_mol_protein_length_335__LYSYL-TRNA-DEPENDENT_L-YSYL-PHOSPHATIDYLGYCEROL_SYNTHASE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 842
# Identity:     149/842 (17.7%)
# Similarity:   212/842 (25.2%)
# Gaps:         519/842 (61.6%)
# Score: 768.0
# 
#
#=======================================

sp_Q9AIV3_MPR      1 MNQEVKNKIFSILKITFATALFIFVAITLYRELSGINFKDTLVEFSKINR     50
                                                                       
4v36_A_mol_pr      0 --------------------------------------------------      0

sp_Q9AIV3_MPR     51 MSLVLLFIGGGASLVILSMYDVILSRALKMDISLGKVLRVSYIINALNAI    100
                                                                       
4v36_A_mol_pr      0 --------------------------------------------------      0

sp_Q9AIV3_MPR    101 VGFGGFIGAGVRAMVYKNYTHDKKKLVHFISLILISMLTGLSLLSLLIVF    150
                                                                       
4v36_A_mol_pr      0 --------------------------------------------------      0

sp_Q9AIV3_MPR    151 HVFDASLILDKITWVRWVLYVVSFFLPLFIIYSMVRPPDKNNRFVGLYCT    200
                                                                       
4v36_A_mol_pr      0 --------------------------------------------------      0

sp_Q9AIV3_MPR    201 LVSCVEWLAAAVVLYFCGVIVDAHVSFMSFIAIFIIAALSGLVSFIPGGF    250
                                                                       
4v36_A_mol_pr      0 --------------------------------------------------      0

sp_Q9AIV3_MPR    251 GAFDLVVLLGFKTLGVPEEKVLLMLLLYRFAYYFVPVIIALILSSFEFGT    300
                                                                       
4v36_A_mol_pr      0 --------------------------------------------------      0

sp_Q9AIV3_MPR    301 SAKKYIEGSKYFIPAKDVTSFLMSYQKDIIAKIPSLSLAILVFFTSMIFF    350
                                                                       
4v36_A_mol_pr      0 --------------------------------------------------      0

sp_Q9AIV3_MPR    351 VNNLTIVYDALYDGNHLTYYILLAIHTSACLLLLLNVVGIYKQSRRAIIF    400
                                                                       
4v36_A_mol_pr      0 --------------------------------------------------      0

sp_Q9AIV3_MPR    401 AMISILLITVATFFTYASYILITWLAIIFVLLIVAFRRARRLKRPVRMRN    450
                                                                       
4v36_A_mol_pr      0 --------------------------------------------------      0

sp_Q9AIV3_MPR    451 IVAMLLFSLFILYVNHIFIAGTLYALDIYTIEMHTSVLRYYFWLTILIIA    500
                                                                       
4v36_A_mol_pr      0 --------------------------------------------------      0

sp_Q9AIV3_MPR    501 IIIGMIAWLFDYQFSKVRISSKIEDCEEIINQYGGNYLSHLIYSGDKQFF    550
                                   .::......|..|..:.:.|||.||||.:.|||:||
4v36_A_mol_pr      1 --------------KEIGEEPDPEKLEAFLEEKGGNALSHLGFLGDKRFF     36

sp_Q9AIV3_MPR    551 TNENKTAFLMYRYKASSLVVLGDPLGDENAFDELLEAFYNYAEYLGYDVI    600
                     .:.:..|.:.:......|||||||.|.|::|..:::.|.:.|:..||.||
4v36_A_mol_pr     37 YSSDGNALIQFAKVGQRLVVLGDPSGREDSFPLVIKEFLHAADQKGYLVI     86

sp_Q9AIV3_MPR    601 FYQVTDQHMPLYHNFGNQFFKLGEEAIIDLTQFSTSGKKRRGFRATLNKF    650
                     |||:..:.|.|||:||.:|||||||||:||..|:.|||||.|.||..|:|
4v36_A_mol_pr     87 FYQIEREDMALYHDFGYRFFKLGEEAIVDLDTFTISGKKRAGLRAIYNRF    136

sp_Q9AIV3_MPR    651 DELNISFEIIEPPFSTEFINELQHVSDLWLDNRQEMHFSVGEFNEEYLSK    700
                     :....:|.:.:||||.||:|||:.|||.||..::|..||:|.|.|:||.|
4v36_A_mol_pr    137 EREGYTFHVEQPPFSREFLNELRQVSDEWLGRKKEKGFSLGFFQEDYLQK    186

sp_Q9AIV3_MPR    701 APIGVMRNEENEVIAFCSLMPTYFNDAISVDLIRWLPELDLPLMDGLYLH    750
                     |||.|:::||.|::||.::||.|....||:||:|:..:....:||.|:::
4v36_A_mol_pr    187 APIAVLKSEEGEIVAFMNIMPMYREGEISIDLMRYSKKAPKGIMDALFIY    236

sp_Q9AIV3_MPR    751 MLLWSKEQGYTKFNMGMATLSNVGQLHYSYLRERLAGRVFEHFNGLYRFQ    800
                     :..|.||||||.||||||.|||||.   |:..||||..:|.:.:.:|.|.
4v36_A_mol_pr    237 LFQWGKEQGYTAFNMGMAPLSNVGT---SFWTERLAAVIFNNVSYMYSFS    283

sp_Q9AIV3_MPR    801 GLRRYKSKYNPNWEPRFLVYRKDNSLWESLSKVMRVIRHK--    840
                     |||.:|.||.|.|..::|.|||:.||..::..|.|:|..:  
4v36_A_mol_pr    284 GLRSFKEKYKPVWRGKYLAYRKNRSLPVTMILVTRLIGRRTK    325


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