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# Program: needle
# Rundate: Wed 30 May 2018 12:00:31
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/models_new/seqid60_90/sp_P44345_RL4_HAEIN_4u20_DE/needle.txt
#    -asequence /Users/teresatavella/Documents/models_new/seqid60_90/sp_P44345_RL4_HAEIN_4u20_DE/sp_P44345_RL4_HAEIN_50S_ribosomal_protein_L4_OS_Haemophilus_influenzae_strain_ATCC_51907__DSM_11121__KW20__Rd_OX_71421_GN_rplD_PE_3_SV_1.fa
#    -bsequence /Users/teresatavella/Documents/models_new/seqid60_90/sp_P44345_RL4_HAEIN_4u20_DE/4u20_E.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/models_new/seqid60_90/sp_P44345_RL4_HAEIN_4u20_DE/needle.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: sp_P44345_RL4_HAEIN_50S_ribosomal_protein_L4_OS_Haemophilus_influenzae_strain_ATCC_51907__DSM_11121__KW20__Rd_OX_71421_GN_rplD_PE_3_SV_1
# 2: 4u20_E_mol_protein_length_201__50S_ribosomal_protein_L4
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity:     168/201 (83.6%)
# Similarity:   187/201 (93.0%)
# Gaps:           1/201 ( 0.5%)
# Score: 857.0
# 
#
#=======================================

sp_P44345_RL4      1 MELQVVGA-NALTVSETTFGREFNEALIHQVVVAYAAGARQGTRAQKTRA     49
                     |||.:..| :|||||||||||:|||||:||||||||||||||||||||||
4u20_E_mol_pr      1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRA     50

sp_P44345_RL4     50 EVSGSGKKPWRQKGTGRARAGDIKSPIWRSGGTTFAAKPQDHSQKVNKKM     99
                     ||:||||||||||||||||:|.||||||||||.||||:||||||||||||
4u20_E_mol_pr     51 EVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKM    100

sp_P44345_RL4    100 YRGAIKSILSELVRQDRLVVVEKFELDAPKTKVLVQKLKDLAVEDALIIT    149
                     ||||:|||||||||||||:|||||.::|||||:|.|||||:|:||.||||
4u20_E_mol_pr    101 YRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIIT    150

sp_P44345_RL4    150 ASLDENLFLAARNLYKVDVRDVQGIDPVSLIAFDKVIVTVDAVKQIEEIL    199
                     ..||||||||||||:||||||..|||||||||||||::|.|||||:||:|
4u20_E_mol_pr    151 GELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML    200

sp_P44345_RL4    200 A    200
                     |
4u20_E_mol_pr    201 A    201


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