######################################## # Program: needle # Rundate: Wed 30 May 2018 12:32:04 # Commandline: needle # -outfile /Users/teresatavella/Documents/models_new/seqid60_90/sp_P16657_FABI_SALTY_1qsg_C/needle.txt # -asequence /Users/teresatavella/Documents/models_new/seqid60_90/sp_P16657_FABI_SALTY_1qsg_C/sp_P16657_FABI_SALTY_Enoyl-_acyl-carrier-protein_reductase__NADH_FabI_OS_Salmonella_typhimurium_strain_LT2__SGSC1412__ATCC_700720_OX_99287_GN_fabI_PE_1_SV_3.fa # -bsequence /Users/teresatavella/Documents/models_new/seqid60_90/sp_P16657_FABI_SALTY_1qsg_C/1qsg_C.fa # -gapopen 10 # -gapextend 0.5 # Align_format: srspair # Report_file: /Users/teresatavella/Documents/models_new/seqid60_90/sp_P16657_FABI_SALTY_1qsg_C/needle.txt ######################################## #======================================= # # Aligned_sequences: 2 # 1: sp_P16657_FABI_SALTY_Enoyl-_acyl-carrier-protein_reductase__NADH_FabI_OS_Salmonella_typhimurium_strain_LT2__SGSC1412__ATCC_700720_OX_99287_GN_fabI_PE_1_SV_3 # 2: 1qsg_C_mol_protein_length_265__ENOYL-[ACYL-CARRIER-PROTEIN]_REDUCTASE # Matrix: EBLOSUM62 # Gap_penalty: 10.0 # Extend_penalty: 0.5 # # Length: 262 # Identity: 252/262 (96.2%) # Similarity: 254/262 (96.9%) # Gaps: 4/262 ( 1.5%) # Score: 1277.0 # # #======================================= sp_P16657_FAB 1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE 50 ||||||||||||||||||||||||||||||||||||||||||||||||| 1qsg_C_mol_pr 1 -GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE 49 sp_P16657_FAB 51 FAAQLGSSIVLPCDVAEDASIDAMFAELGNVWPKFDGFVHSIGFAPGDQL 100 |||||||.|||.||||||||||.||||||.|||||||||||||||||||| 1qsg_C_mol_pr 50 FAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQL 99 sp_P16657_FAB 101 DGDYVNAVTREGFKVAHDISSYSFVAMAKACRTMLNPGSALLTLSYLGAE 150 ||||||||||||||:|||||||||||||||||:||||||||||||||||| 1qsg_C_mol_pr 100 DGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE 149 sp_P16657_FAB 151 RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI 200 |||||||||||||||||||||||||||||||||||||||||||||||||| 1qsg_C_mol_pr 150 RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI 199 sp_P16657_FAB 201 KDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 250 |||||||||||||||||||||||||||||||||||||||||||||||||| 1qsg_C_mol_pr 200 KDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 249 sp_P16657_FAB 251 FSIAAMNELELK 262 ||||||||| 1qsg_C_mol_pr 250 FSIAAMNEL--- 258 #--------------------------------------- #---------------------------------------