########################################
# Program: needle
# Rundate: Wed 30 May 2018 10:27:17
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/models_new/seqid60_90/sp_P0C0Q9_GYRA_STAEP_5iwi_A/needle.txt
#    -asequence /Users/teresatavella/Documents/models_new/seqid60_90/sp_P0C0Q9_GYRA_STAEP_5iwi_A/sp_P0C0Q9_GYRA_STAEP_DNA_gyrase_subunit_A_Fragment_OS_Staphylococcus_epidermidis_OX_1282_GN_gyrA_PE_1_SV_1.fa
#    -bsequence /Users/teresatavella/Documents/models_new/seqid60_90/sp_P0C0Q9_GYRA_STAEP_5iwi_A/5iwi_A.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/models_new/seqid60_90/sp_P0C0Q9_GYRA_STAEP_5iwi_A/needle.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: sp_P0C0Q9_GYRA_STAEP_DNA_gyrase_subunit_A_Fragment_OS_Staphylococcus_epidermidis_OX_1282_GN_gyrA_PE_1_SV_1
# 2: 5iwi_A_mol_protein_length_490__DNA_gyrase_subunit_A
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 491
# Identity:      84/491 (17.1%)
# Similarity:    85/491 (17.3%)
# Gaps:         405/491 (82.5%)
# Score: 434.0
# 
#
#=======================================

sp_P0C0Q9_GYR      1 MAELPQSRINERNITSEMRESFLDYAMSVIVSRALPDVRDGLKPVHRRIL     50
                             |||||||||||||||||||||||:||||||||||||||||||
5iwi_A_mol_pr      1 --------INERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRIL     42

sp_P0C0Q9_GYR     51 YGLNEQGMTPDKPYKKSARIVGDVMGKYHPHGDSSIYEAMVRMA------     94
                     ||||||||||||.|||||||||||||||||||||||||||||||      
5iwi_A_mol_pr     43 YGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYR     92

sp_P0C0Q9_GYR     94 --------------------------------------------------     94
                                                                       
5iwi_A_mol_pr     93 YPLVDGQGNFGSMDGDGAAAMRFTEARMTKITLELLRDINKDTIDFIDNY    142

sp_P0C0Q9_GYR     94 --------------------------------------------------     94
                                                                       
5iwi_A_mol_pr    143 DGNEREPSVLPARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSK    192

sp_P0C0Q9_GYR     94 --------------------------------------------------     94
                                                                       
5iwi_A_mol_pr    193 NPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSIQMRSRAVIE    242

sp_P0C0Q9_GYR     94 --------------------------------------------------     94
                                                                       
5iwi_A_mol_pr    243 ERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRT    292

sp_P0C0Q9_GYR     94 --------------------------------------------------     94
                                                                       
5iwi_A_mol_pr    293 GVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKE    342

sp_P0C0Q9_GYR     94 --------------------------------------------------     94
                                                                       
5iwi_A_mol_pr    343 ALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRE    392

sp_P0C0Q9_GYR     94 --------------------------------------------------     94
                                                                       
5iwi_A_mol_pr    393 SDTDKVAMESLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLN    442

sp_P0C0Q9_GYR     94 -----------------------------------------     94
                                                              
5iwi_A_mol_pr    443 YISELETILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLG    483


#---------------------------------------
#---------------------------------------