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# Program: needle
# Rundate: Tue 12 Jun 2018 18:38:31
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/negativedb/seqid60_90/sp_P0A475_RL16_STRPN_5njt_f/needle.txt
#    -asequence /Users/teresatavella/Documents/negativedb/seqid60_90/sp_P0A475_RL16_STRPN_5njt_f/sp_P0A475_RL16_STRPN_50S_ribosomal_protein_L16_OS_Streptococcus_pneumoniae_serotype_4_strain_ATCC_BAA-334__TIGR4_OX_170187_GN_rplP_PE_1_SV_1.fa
#    -bsequence /Users/teresatavella/Documents/negativedb/seqid60_90/sp_P0A475_RL16_STRPN_5njt_f/5njt_f.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/negativedb/seqid60_90/sp_P0A475_RL16_STRPN_5njt_f/needle.txt
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#=======================================
#
# Aligned_sequences: 2
# 1: sp_P0A475_RL16_STRPN_50S_ribosomal_protein_L16_OS_Streptococcus_pneumoniae_serotype_4_strain_ATCC_BAA-334__TIGR4_OX_170187_GN_rplP_PE_1_SV_1
# 2: 5njt_f_mol_protein_length_138__50S_ribosomal_protein_L16
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 138
# Identity:     111/138 (80.4%)
# Similarity:   121/138 (87.7%)
# Gaps:           1/138 ( 0.7%)
# Score: 573.0
# 
#
#=======================================

sp_P0A475_RL1      1 MLVPKRVKHRREFRGKMRGEAKGGKEVAFGEYGLQATTSHWITNRQIEAA     50
                     ||:|||||:|||.||||||.||||.||.|||:|:||..:.||||||||||
5njt_f_mol_pr      1 MLLPKRVKYRREHRGKMRGRAKGGTEVHFGEFGIQALEASWITNRQIEAA     50

sp_P0A475_RL1     51 RIAMTRYMKRGGKVWIKIFPHKSYTAKAIGVRMGSGKGAPEGWVAPVKRG    100
                     ||||||||||||||||||||.|.||||.:.|||||||||||||||.||.|
5njt_f_mol_pr     51 RIAMTRYMKRGGKVWIKIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPG    100

sp_P0A475_RL1    101 KVMFEIAGVSEEIAREALRLASHKLPVKCKFVKREAE-    137
                     ||:|||:|||||:|||||||||||||:|.||||||.. 
5njt_f_mol_pr    101 KVLFEISGVSEEVAREALRLASHKLPIKTKFVKREEIG    138


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