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# Program: needle
# Rundate: Wed 30 May 2018 13:13:14
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/models_new/seqid60_low90/sp_O33807_BLC4_SALTM_2zq8_A/needle.txt
#    -asequence /Users/teresatavella/Documents/models_new/seqid60_low90/sp_O33807_BLC4_SALTM_2zq8_A/sp_O33807_BLC4_SALTM_Beta-lactamase_CTX-M-4_OS_Salmonella_typhimurium_OX_90371_GN_bla_PE_1_SV_1.fa
#    -bsequence /Users/teresatavella/Documents/models_new/seqid60_low90/sp_O33807_BLC4_SALTM_2zq8_A/2zq8_A.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/models_new/seqid60_low90/sp_O33807_BLC4_SALTM_2zq8_A/needle.txt
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#=======================================
#
# Aligned_sequences: 2
# 1: sp_O33807_BLC4_SALTM_Beta-lactamase_CTX-M-4_OS_Salmonella_typhimurium_OX_90371_GN_bla_PE_1_SV_1
# 2: 2zq8_A_mol_protein_length_262__Beta-lactamase_Toho-1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     251/291 (86.3%)
# Similarity:   255/291 (87.6%)
# Gaps:          30/291 (10.3%)
# Score: 1272.0
# 
#
#=======================================

sp_O33807_BLC      1 MMTQSIRRSMLTVMATLPLLFSSATLHAQANSVQQQLEALEKSSGGRLGV     50
                                                   ||||||||||||||||||||
2zq8_A_mol_pr      1 ------------------------------NSVQQQLEALEKSSGGRLGV     20

sp_O33807_BLC     51 AQINTADNSQILYVADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEI    100
                     |.|||||||||||.||||||||||||||||||||||||||||||||||||
2zq8_A_mol_pr     21 ALINTADNSQILYRADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEI     70

sp_O33807_BLC    101 RASDLVNYNPIAEKHVNGTMTLAELGAGALQYSDNTAMNKLIAHLGGPDK    150
                     :.|||||||||||||||||||||||||.||||||||||||||||||||||
2zq8_A_mol_pr     71 KKSDLVNYNPIAEKHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDK    120

sp_O33807_BLC    151 VTAFARSLGDETFRLDRTEPTLNSAIPGDPRDTTTPLAMAQTLKNLTLGK    200
                     |||||||||||||||||||||||:||||||||||||||||||||||||||
2zq8_A_mol_pr    121 VTAFARSLGDETFRLDRTEPTLNTAIPGDPRDTTTPLAMAQTLKNLTLGK    170

sp_O33807_BLC    201 ALAETQRAQLVTWLKGNTTGSASIRAGMPKSWGVGDKTGSGDYGTTNDIA    250
                     |||||||||||||||||||||||||||:||||.|||||||||||||||||
2zq8_A_mol_pr    171 ALAETQRAQLVTWLKGNTTGSASIRAGLPKSWVVGDKTGSGDYGTTNDIA    220

sp_O33807_BLC    251 VIWPENHAPLVLVTYFTQPEQKAESRRDILAAAAKIVTHGF    291
                     ||||||||||||||||||||||||:|.||||||||||||||
2zq8_A_mol_pr    221 VIWPENHAPLVLVTYFTQPEQKAENRNDILAAAAKIVTHGF    261


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