########################################
# Program: needle
# Rundate: Wed 30 May 2018 16:44:28
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/models_new/seqid30_low85/gb_WP_002356022_ARO_3003797_Enterococcus_5xt3_B/needle.txt
#    -asequence /Users/teresatavella/Documents/models_new/seqid30_low85/gb_WP_002356022_ARO_3003797_Enterococcus_5xt3_B/gb_WP_002356022_ARO_3003797_Enterococcus_faecalis_YybT_with_mutation_conferring_daptomycin_resistance__Enterococcus.fa
#    -bsequence /Users/teresatavella/Documents/models_new/seqid30_low85/gb_WP_002356022_ARO_3003797_Enterococcus_5xt3_B/5xt3_B.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/models_new/seqid30_low85/gb_WP_002356022_ARO_3003797_Enterococcus_5xt3_B/needle.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: gb_WP_002356022_ARO_3003797_Enterococcus_faecalis_YybT_with_mutation_conferring_daptomycin_resistance__Enterococcus
# 2: 5xt3_B_mol_protein_length_339__Phosphodiesterase_acting_on_cyclic_dinucleotides
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 658
# Identity:     159/658 (24.2%)
# Similarity:   222/658 (33.7%)
# Gaps:         325/658 (49.4%)
# Score: 789.0
# 
#
#=======================================

gb_WP_0023560      1 MQKKRIQKNGFLIVVGLLLVEFLLYFLLTNKWLLLAVIIALDIFLLVVIR     50
                                                                       
5xt3_B_mol_pr      0 --------------------------------------------------      0

gb_WP_0023560     51 LLIRDVEITNVEKIQEASSIAEQSLDYVVNEVPVGIITYNGETRAVEWLN    100
                                                                       
5xt3_B_mol_pr      0 --------------------------------------------------      0

gb_WP_0023560    101 PYAASIFNKDNQLTLTASQVTSYLELAERNQDIFTIDENTYRFSVNKEQH    150
                                                                       
5xt3_B_mol_pr      0 --------------------------------------------------      0

gb_WP_0023560    151 TITFEDITKESNLYQEKVEMQTAIGIVSVDNYDDVTDTMDEKEISYLNSF    200
                                                                       
5xt3_B_mol_pr      0 --------------------------------------------------      0

gb_WP_0023560    201 ITTMVSDWMDQYKVFYKRINAERYFFIAQWEDIQKMMDEKFSILDTIRKE    250
                                                                       
5xt3_B_mol_pr      0 --------------------------------------------------      0

gb_WP_0023560    251 SANHEVAITLSMGIAYGGPTLDQTGTTAQTNLDTALVRGGDQVVVKEAKD    300
                                                                       
5xt3_B_mol_pr      0 --------------------------------------------------      0

gb_WP_0023560    301 EAKPLFFGGKTAVTTKRSQVRSRAMSMAIKGIIAESADIYIMGHRYPDMD    350
                                        ||:|.:|.|:|.|:||...:.||||:.||:|
5xt3_B_mol_pr      1 -------------------VRARVISHALKDILAEGDKVIIMGHKRPDLD     31

gb_WP_0023560    351 ALGSAFGVARLASFNNRKAWIVLDENEIIPDVKRVLEAIKEYPELEERII    400
                     |:|:|.||:|.|..||.:|:|||:|.:|.|.::||:..|.:.|||.||.|
5xt3_B_mol_pr     32 AIGAAIGVSRFAMMNNLEAYIVLNETDIDPTLRRVMNEIDKKPELRERFI     81

gb_WP_0023560    401 SPKEAMKRKKESSLLVMVDYHKPSLSISQELYERFDKVVIIDHHRRGDEF    450
                     :..:|.......:.:|:||.|||.|.:.:.:..:.::.|:|||||||:.|
5xt3_B_mol_pr     82 TSDDAWDMMTSKTTVVIVDTHKPELVLDENVLNKANRKVVIDHHRRGESF    131

gb_WP_0023560    451 PAKPLLSYIESSASSASELVTELIEYQSNSANKLQAFEATMMLAGIVVDT    500
                     .:.|||.|:|..|||.:||||||:|||. :..:|...|:|:|.|||:|||
5xt3_B_mol_pr    132 ISNPLLIYMEPYASSTAELVTELLEYQP-TEQRLTRLESTVMYAGIIVDT    180

gb_WP_0023560    501 KSFNTRTTARTFDVASYLRTCGADSSLVQYLLSSDLTSYLEMNNLISKSE    550
                     ::|..||.:||||.|||||..|||:.|.|:.|..|:.:|:..:.||...:
5xt3_B_mol_pr    181 RNFTLRTGSRTFDAASYLRAHGADTILTQHFLKDDVDTYINRSELIRTVK    230

gb_WP_0023560    551 YVTKDTVVVAGSEDKEYDSVTAAKTADTLLSMAGINAAFVITKRTDQQIG    600
                     .......:..||:||.|..||.|:.||.|||:.||.|::|:.:|.|..||
5xt3_B_mol_pr    231 VEDNGIAIAHGSDDKIYHPVTVAQAADELLSLEGIEASYVVARREDNLIG    280

gb_WP_0023560    601 ISARSNGSINVQIIMENLGGGGHFTNAAVQLSNVTVAEVKEQLLDVIRQN    650
                     |||||.||:|||:.||.||||||.||||.||..|||.|...||...|.:.
5xt3_B_mol_pr    281 ISARSLGSVNVQLTMEALGGGGHLTNAATQLKGVTVEEAIAQLQQAITEQ    330

gb_WP_0023560    651 INEMYEQE    658
                     ::.     
5xt3_B_mol_pr    331 LSR-----    333


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