########################################
# Program: needle
# Rundate: Wed 30 May 2018 16:43:15
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/models_new/seqid30_low85/gb_NP_251182.1_ARO_3000814_MexT_2esn_A/needle.txt
#    -asequence /Users/teresatavella/Documents/models_new/seqid30_low85/gb_NP_251182.1_ARO_3000814_MexT_2esn_A/gb_NP_251182.1_ARO_3000814_MexT__Pseudomonas_aeruginosa_PAO1.fa
#    -bsequence /Users/teresatavella/Documents/models_new/seqid30_low85/gb_NP_251182.1_ARO_3000814_MexT_2esn_A/2esn_A.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/models_new/seqid30_low85/gb_NP_251182.1_ARO_3000814_MexT_2esn_A/needle.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: gb_NP_251182.1_ARO_3000814_MexT__Pseudomonas_aeruginosa_PAO1
# 2: 2esn_A_mol_protein_length_310__probable_transcriptional_regulator
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity:     102/366 (27.9%)
# Similarity:   139/366 (38.0%)
# Gaps:          86/366 (23.5%)
# Score: 312.0
# 
#
#=======================================

gb_NP_251182.      1 MPVSDPMPLRHLARPRPVSHARLDGEPPRLQPLAPGNEERHEPKRPAPRR     50
                                                                       
2esn_A_mol_pr      0 --------------------------------------------------      0

gb_NP_251182.     51 SEPADRVRDPDARTQRDP-RRRETVPRPAGQPAISA-----ALSRLRTLF     94
                       |..|..|.:.....|. .|...|...|.:.||||     ||.|||...
2esn_A_mol_pr      1 --PLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGL     48

gb_NP_251182.     95 DDPLFVRTGRSMEPTARAQEIFAHLSPALDSISTAMSRASEFDPATSTAV    144
                     ||.||:|.|..|:||.||:.:.|.::.||.::...:.....|.|..|...
2esn_A_mol_pr     49 DDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPGQSQRT     98

gb_NP_251182.    145 FRIGLSDDVEFGLLPPLLRRLRAEAPGFVLVVRRANYLLMPNLLASGEIS    194
                     |....:|...|.|||||:.||:..|||..|.:..|...|....||||.|.
2esn_A_mol_pr     99 FVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERKLSVEALASGRID    148

gb_NP_251182.    195 VGVSYTDE---LPAN-------AKRKTV--RRSKPKILRADSAPGQLTLD    232
                     ..:.|.:|   ||..       |.|..|  ||..|::      .|..||:
2esn_A_mol_pr    149 FALGYDEEHERLPEGIQAHDWFADRYVVVARRDHPRL------AGAPTLE    192

gb_NP_251182.    233 DYCARPHALVSFAGDLSGFVDEELEKFGRKRKVVLAVPQFNGLGTLLAGT    282
                     .|.|..||:|:...:.||.:|..|.:.|.:|:|.:.:|.......|...|
2esn_A_mol_pr    193 GYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGST    242

gb_NP_251182.    283 DIIATVPDYAAQALIAAGGLRAEDPPFETRAFELSMAWRGAQDNDPAERW    332
                     |.:.|.|.:||:||..|.||.....||:...:.|.: :...|..| |..|
2esn_A_mol_pr    243 DFLLTAPRHAARALAEAAGLALYPAPFDIPPYVLRL-YSHVQGRD-AHAW    290

gb_NP_251182.    333 LRSRISMFIGDPDSL-    347
                     :       ||....| 
2esn_A_mol_pr    291 M-------IGQLKGLD    299


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