########################################
# Program: needle
# Rundate: Wed 30 May 2018 15:13:38
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/models_new/seqid30_85/gb_CDJ73208_ARO_3003890_Escherichia_1pw4_A/needle.txt
#    -asequence /Users/teresatavella/Documents/models_new/seqid30_85/gb_CDJ73208_ARO_3003890_Escherichia_1pw4_A/gb_CDJ73208_ARO_3003890_Escherichia_coli_UhpT_with_mutation_conferring_resistance_to_fosfomycin__Escherichia_coli_str._K-12_substr._MC4100.fa
#    -bsequence /Users/teresatavella/Documents/models_new/seqid30_85/gb_CDJ73208_ARO_3003890_Escherichia_1pw4_A/1pw4_A.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/models_new/seqid30_85/gb_CDJ73208_ARO_3003890_Escherichia_1pw4_A/needle.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: gb_CDJ73208_ARO_3003890_Escherichia_coli_UhpT_with_mutation_conferring_resistance_to_fosfomycin__Escherichia_coli_str._K-12_substr._MC4100
# 2: 1pw4_A_mol_protein_length_451__Glycerol-3-phosphate_transporter
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 475
# Identity:     153/475 (32.2%)
# Similarity:   229/475 (48.2%)
# Gaps:          53/475 (11.2%)
# Score: 588.5
# 
#
#=======================================

gb_CDJ73208_A      1 MLAFL---NQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYLIRK     47
                        |.   ::.|.|..::....||..|     |.:|.:|.||...||:||
1pw4_A_mol_pr      1 ---FKPAPHKARLPAAEIDPTYRRLRW-----QIFLGIFFGYAAYYLVRK     42

gb_CDJ73208_A     48 NFNIAQNDMISTYGLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQF     97
                     ||.:|...::. .|.|...||....|.||.||..|.::...:|..|.:.|
1pw4_A_mol_pr     43 NFALAMPYLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF     91

gb_CDJ73208_A     98 LPFMLILSAICML--GFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSY    145
                     ||..|||:|..||  || ....:.|:::..::.|  |.|:||..|.....
1pw4_A_mol_pr     92 LPAGLILAAAVMLFMGF-VPWATSSIAVMFVLLF--LCGWFQGMGWPPCG    138

gb_CDJ73208_A    146 STITKWTPRRKRGTFLGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMF    195
                     .|:..|..:::||..:..||.:||:||.....:.|.|..:..|.|  ...
1pw4_A_mol_pr    139 RTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWH--AAL    186

gb_CDJ73208_A    196 IFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKETESTDM    245
                     ..|:..|::|.........|:|:|.||...||.             ..|.
1pw4_A_mol_pr    187 YMPAFCAILVALFAFAMMRDTPQSCGLPPIEEY-------------KNDT    223

gb_CDJ73208_A    246 TKWQIFVEYVLKNKVIWLLCFANIFLYVVRIGIDQWSTVYAFQELKLSKA    295
                     .| |||::|||.||::|.:..||:|:|::|.||..||..|    ||..|.
1pw4_A_mol_pr    224 AK-QIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTY----LKEVKH    268

gb_CDJ73208_A    296 VAIQ----GFTLFEAGALVGTLLWGWLSD-LANGRRGLVACIALALI-IA    339
                     .|:.    .:.|:|...:.||||.||:|| :..|.||......:.|: ||
1pw4_A_mol_pr    269 FALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA    318

gb_CDJ73208_A    340 TLGVYQH-ASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAAD    388
                     |:..:.: |.|..:.:..:..:|||::||.:|||:.|:...||||.|.|.
1pw4_A_mol_pr    319 TIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAA    368

gb_CDJ73208_A    389 GIKGTFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCIC    438
                     |..|.|.||.|...|...:|...|      ..||.|.|..:...:|..:.
1pw4_A_mol_pr    369 GFTGLFGYLGGSVAASAIVGYTVD------FFGWDGGFMVMIGGSILAVI    412

gb_CDJ73208_A    439 LMAIVAVMEERKIRREKKIQQLTVA    463
                     |:.:|.:.|:|  |.|:.:|:|.. 
1pw4_A_mol_pr    413 LLIVVMIGEKR--RHEQLLQELVP-    434


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