########################################
# Program: needle
# Rundate: Wed 30 May 2018 10:20:33
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/models_new/seqid60_90/gb_CDJ72593_ARO_3003889_Escherichia_1pw4_A/needle.txt
#    -asequence /Users/teresatavella/Documents/models_new/seqid60_90/gb_CDJ72593_ARO_3003889_Escherichia_1pw4_A/gb_CDJ72593_ARO_3003889_Escherichia_coli_GlpT_with_mutation_conferring_resistance_to_fosfomycin__Escherichia_coli_str._K-12_substr._MC4100.fa
#    -bsequence /Users/teresatavella/Documents/models_new/seqid60_90/gb_CDJ72593_ARO_3003889_Escherichia_1pw4_A/1pw4_A.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/models_new/seqid60_90/gb_CDJ72593_ARO_3003889_Escherichia_1pw4_A/needle.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: gb_CDJ72593_ARO_3003889_Escherichia_coli_GlpT_with_mutation_conferring_resistance_to_fosfomycin__Escherichia_coli_str._K-12_substr._MC4100
# 2: 1pw4_A_mol_protein_length_451__Glycerol-3-phosphate_transporter
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 452
# Identity:     431/452 (95.4%)
# Similarity:   431/452 (95.4%)
# Gaps:          18/452 ( 4.0%)
# Score: 2287.0
# 
#
#=======================================

gb_CDJ72593_A      1 MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFAL     50
                         ||||||||||||||||||||||||||||||||||||||||||||||
1pw4_A_mol_pr      1 ----FKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFAL     46

gb_CDJ72593_A     51 AMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGL    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
1pw4_A_mol_pr     47 AMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGL     96

gb_CDJ72593_A    101 ILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWS    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
1pw4_A_mol_pr     97 ILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWS    146

gb_CDJ72593_A    151 QKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILV    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
1pw4_A_mol_pr    147 QKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILV    196

gb_CDJ72593_A    201 ALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVL    250
                     ||||||||||||||||||||||||||             |||||||||||
1pw4_A_mol_pr    197 ALFAFAMMRDTPQSCGLPPIEEYKND-------------TAKQIFMQYVL    233

gb_CDJ72593_A    251 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEY    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
1pw4_A_mol_pr    234 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEY    283

gb_CDJ72593_A    301 AGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVD    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
1pw4_A_mol_pr    284 AGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVD    333

gb_CDJ72593_A    351 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
1pw4_A_mol_pr    334 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA    383

gb_CDJ72593_A    401 SAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQERN    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||..
1pw4_A_mol_pr    384 SAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELV    433

gb_CDJ72593_A    451 GG    452
                     . 
1pw4_A_mol_pr    434 P-    434


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