######################################## # Program: needle # Rundate: Wed 30 May 2018 11:40:43 # Commandline: needle # -outfile /Users/teresatavella/Documents/models_new/seqid60_90/gb_CAC29732.1_ARO_3003389_Mycobacterium_1eye_A/needle.txt # -asequence /Users/teresatavella/Documents/models_new/seqid60_90/gb_CAC29732.1_ARO_3003389_Mycobacterium_1eye_A/gb_CAC29732.1_ARO_3003389_Mycobacterium_leprae_folP_with_mutation_conferring_resistance_to_dapsone__Mycobacterium_leprae_TN.fa # -bsequence /Users/teresatavella/Documents/models_new/seqid60_90/gb_CAC29732.1_ARO_3003389_Mycobacterium_1eye_A/1eye_A.fa # -gapopen 10 # -gapextend 0.5 # Align_format: srspair # Report_file: /Users/teresatavella/Documents/models_new/seqid60_90/gb_CAC29732.1_ARO_3003389_Mycobacterium_1eye_A/needle.txt ######################################## #======================================= # # Aligned_sequences: 2 # 1: gb_CAC29732.1_ARO_3003389_Mycobacterium_leprae_folP_with_mutation_conferring_resistance_to_dapsone__Mycobacterium_leprae_TN # 2: 1eye_A_mol_protein_length_280__DIHYDROPTEROATE_SYNTHASE_I # Matrix: EBLOSUM62 # Gap_penalty: 10.0 # Extend_penalty: 0.5 # # Length: 284 # Identity: 203/284 (71.5%) # Similarity: 227/284 (79.9%) # Gaps: 28/284 ( 9.9%) # Score: 1019.5 # # #======================================= gb_CAC29732.1 1 MSLAPVQVIGVLNVTDNSFSDGGRYLDPDDAVQHGLAMVAEGAAIVDVGG 50 ||||:|||||||:||||||.|||.||||:|||||.|.||.|||||| 1eye_A_mol_pr 1 ----PVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGG 46 gb_CAC29732.1 51 ESTRPGAIRTDPRVELSRIVPVVKELAAQGITVSIDTTRADVARAALQSG 100 |: ||::|||||||||||||||||.||||||||||:| 1eye_A_mol_pr 47 ET--------------SRVIPVVKELAAQGITVSIDTMRADVARAALQNG 82 gb_CAC29732.1 101 ARIVNDVSGGRADPAMAPLVAEAGVAWVLMHWRLMSAERPYEAPNYRDVV 150 |::|||||||||||||.||:|||.|.|||||||.:||:.|:....|.:|| 1eye_A_mol_pr 83 AQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVV 132 gb_CAC29732.1 151 AEVRADLLAGVDQAVAAGVDPGSLVIDPGLGFAKTGQHNWALLNALPELV 200 |||||||||.|..||||||||..||:|||||||||.|||||:|:|||||| 1eye_A_mol_pr 133 AEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELV 182 gb_CAC29732.1 201 ATGVPILLGASRKRFLGRLLAGADGAVRPPDGRETATAVISALAALHGAW 250 |||:|:|:|||||||||.||||.||.:||.|||:|||||||||||||||| 1eye_A_mol_pr 183 ATGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAW 232 gb_CAC29732.1 251 GVRVHDVRASVDALKVVGAWLHAGPQIEKVRCDG 284 |||||||||||||:|||.||:.|. 1eye_A_mol_pr 233 GVRVHDVRASVDAIKVVEAWMGAE---------- 256 #--------------------------------------- #---------------------------------------