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# Program: needle
# Rundate: Wed 30 May 2018 12:29:22
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/models_new/seqid60_90/gb_CAA67349.1_ARO_3003359_Streptomyces_3u6b_A/needle.txt
#    -asequence /Users/teresatavella/Documents/models_new/seqid60_90/gb_CAA67349.1_ARO_3003359_Streptomyces_3u6b_A/gb_CAA67349.1_ARO_3003359_Streptomyces_cinnamoneus_EF-Tu_mutants_conferring_resistance_to_elfamycin__Streptomyces_cinnamoneus.fa
#    -bsequence /Users/teresatavella/Documents/models_new/seqid60_90/gb_CAA67349.1_ARO_3003359_Streptomyces_3u6b_A/3u6b_A.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/models_new/seqid60_90/gb_CAA67349.1_ARO_3003359_Streptomyces_3u6b_A/needle.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: gb_CAA67349.1_ARO_3003359_Streptomyces_cinnamoneus_EF-Tu_mutants_conferring_resistance_to_elfamycin__Streptomyces_cinnamoneus
# 2: 3u6b_A_mol_protein_length_394__Elongation_factor_Tu_1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity:     274/397 (69.0%)
# Similarity:   317/397 (79.8%)
# Gaps:          28/397 ( 7.1%)
# Score: 1436.0
# 
#
#=======================================

gb_CAA67349.1      1 MAKAKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLHDAIPDLNPFTPFD     50
                          |||||||||:||||||||||||||||||.||              
3u6b_A_mol_pr      1 -----FERTKPHVNVGTIGHVDHGKTTLTAAITTVL--------------     31

gb_CAA67349.1     51 EIDKAPEERQRGITISIAHVEYQTESRHYAHVDCPGHADYIKNMITGAAQ    100
                         |.....|||||:.:||||.|.:||||||||||||||:|||||||||
3u6b_A_mol_pr     32 ----AKTYGGRGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQ     77

gb_CAA67349.1    101 MDGAILVVAATDGPMPQTKEHVLLARQSGVPYIVVALNKADMVDDEEIME    150
                     ||||||||||||||||||:||:||.||.|||||:|.|||.|||||||::|
3u6b_A_mol_pr     78 MDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLE    127

gb_CAA67349.1    151 LVELEVRELLSEYEFDGDNCPVVQVSALKALEGDKEWGEKLLGLMKAVDE    200
                     |||:|||||||:|:|.||:.|:|:.|||||||||.||..|:|.|...:|.
3u6b_A_mol_pr    128 LVEMEVRELLSQYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDS    177

gb_CAA67349.1    201 NIPQPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLKVNETVDIIGI    250
                     .||:|||.:|||||:||||||:|    ||||||:|||::||.|.|:|:||
3u6b_A_mol_pr    178 YIPEPERAIDKPFLLPIEDVFSI----TVVTGRVERGIIKVGEEVEIVGI    223

gb_CAA67349.1    251 KTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERGQCIIKPG    300
                     | |...:|.||:||||||||||:||||||:||||||||::||||.:.|||
3u6b_A_mol_pr    224 K-ETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPG    272

gb_CAA67349.1    301 TVTPHTEFEATAYILSKDEGGRHTPFFNNYRPQFYFRTTDVTGVVTLKEG    350
                     |:.|||:||:..|||||||||||||||..||||||||||||||.:.|.||
3u6b_A_mol_pr    273 TIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEG    322

gb_CAA67349.1    351 TEMVMPGDNAEMTVNLIQPVAMEEGLRFTIREGGRTVGAGQVVKINK    397
                     .||||||||.:|.|.||.|:||::||||.|||||||||||.|.|:..
3u6b_A_mol_pr    323 VEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLG    369


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