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# Program: needle
# Rundate: Wed 30 May 2018 16:59:43
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/models_new/seqid30_low85/gb_ADT64081.1_ARO_3000813_MexS_3jyn_A/needle.txt
#    -asequence /Users/teresatavella/Documents/models_new/seqid30_low85/gb_ADT64081.1_ARO_3000813_MexS_3jyn_A/gb_ADT64081.1_ARO_3000813_MexS__Pseudomonas_aeruginosa_PAK.fa
#    -bsequence /Users/teresatavella/Documents/models_new/seqid30_low85/gb_ADT64081.1_ARO_3000813_MexS_3jyn_A/3jyn_A.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/models_new/seqid30_low85/gb_ADT64081.1_ARO_3000813_MexS_3jyn_A/needle.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: gb_ADT64081.1_ARO_3000813_MexS__Pseudomonas_aeruginosa_PAK
# 2: 3jyn_A_mol_protein_length_325__Quinone_oxidoreductase
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity:      98/364 (26.9%)
# Similarity:   150/364 (41.2%)
# Gaps:          64/364 (17.6%)
# Score: 265.0
# 
#
#=======================================

gb_ADT64081.1      1 MSRVIRFHQFGPPEVLKCEELPTPAPAAGEVLVRVQAIGVSWKDVLWRQN     50
                     |::.|:|...|.||||:..:....||....|:||.:|||:::.|..:|..
3jyn_A_mol_pr      1 MAKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSG     50

gb_ADT64081.1     51 LAPEQAALPSGLGFELAGEVLAVGAGVGDLPLGSRVASFPAHTPDHYPAY    100
                     |.| ...||||||.|.||.|.|||..|....:|.||    |:......||
3jyn_A_mol_pr     51 LYP-APFLPSGLGAEGAGVVEAVGDEVTRFKVGDRV----AYGTGPLGAY     95

gb_ADT64081.1    101 GDVVLMPRAALA-VYPEVLTPVEASVYYTGLLVAYFGLVDLAGLKAGQTV    149
                     .:|.::|.|.|. :...|.....|::...||.|.|. |.....:|.|:.:
3jyn_A_mol_pr     96 SEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYL-LRQTYQVKPGEII    144

gb_ADT64081.1    150 LITEAARMYGPVSIQLAKALGARVIASTKSAEEREFLREQGADKVVVTDE    199
                     |...||...|.::.|.||||||::|.:..|.|:....:..||.:.:....
3jyn_A_mol_pr    145 LFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSH    194

gb_ADT64081.1    200 QDLVLEVERFTEGKGVNVILDELGGPQMTLLGDVSATRGKLVLYGCNGG-    248
                     :|:...|...|:||...|:.|.:|........|..|.||.:|.:|...| 
3jyn_A_mol_pr    195 EDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNASGP    244

gb_ADT64081.1    249 -----------NESAF---PACAAF---KKHLQFYRHCLMDFTGHPEMGL    281
                                .:|.:   |...::   .::||.....|.|.....::.:
3jyn_A_mol_pr    245 VSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKV    294

gb_ADT64081.1    282 ERNDESVSK--ALAHIE----QLTRDRLLKPVVDRVFEFDQVVEAHRYME    325
                     :..::...|  |.|.||    :.|...:|.|                   
3jyn_A_mol_pr    295 DGIEQYALKDAAKAQIELSARRTTGSTILIP-------------------    325

gb_ADT64081.1    326 TCPKRGRVVIHVAD    339
                                   
3jyn_A_mol_pr    325 --------------    325


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