########################################
# Program: needle
# Rundate: Wed 30 May 2018 12:24:46
# Commandline: needle
#    -outfile /Users/teresatavella/Documents/models_new/seqid60_90/gb_AAN82549.1_ARO_3003369_Escherichia_4pc3_A/needle.txt
#    -asequence /Users/teresatavella/Documents/models_new/seqid60_90/gb_AAN82549.1_ARO_3003369_Escherichia_4pc3_A/gb_AAN82549.1_ARO_3003369_Escherichia_coli_EF-Tu_mutants_conferring_resistance_to_Pulvomycin__Escherichia_coli_CFT073.fa
#    -bsequence /Users/teresatavella/Documents/models_new/seqid60_90/gb_AAN82549.1_ARO_3003369_Escherichia_4pc3_A/4pc3_A.fa
#    -gapopen 10
#    -gapextend 0.5
# Align_format: srspair
# Report_file: /Users/teresatavella/Documents/models_new/seqid60_90/gb_AAN82549.1_ARO_3003369_Escherichia_4pc3_A/needle.txt
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: gb_AAN82549.1_ARO_3003369_Escherichia_coli_EF-Tu_mutants_conferring_resistance_to_Pulvomycin__Escherichia_coli_CFT073
# 2: 4pc3_A_mol_protein_length_394__Elongation_factor_Tu_1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 409
# Identity:     363/409 (88.8%)
# Similarity:   363/409 (88.8%)
# Gaps:          46/409 (11.2%)
# Score: 1860.0
# 
#
#=======================================

gb_AAN82549.1      1 MLSPEGESTIVRNIAVSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTV     50
                                            |||||||||||||||||||||||||||
4pc3_A_mol_pr      1 -----------------------TKPHVNVGTIGHVDHGKTTLTAAITTV     27

gb_AAN82549.1     51 LAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGH    100
                     |||||||                       ||||||||||||||||||||
4pc3_A_mol_pr     28 LAKTYGG-----------------------SHVEYDTPTRHYAHVDCPGH     54

gb_AAN82549.1    101 ADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
4pc3_A_mol_pr     55 ADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFL    104

gb_AAN82549.1    151 NKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALEGDAEW    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
4pc3_A_mol_pr    105 NKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALEGDAEW    154

gb_AAN82549.1    201 EAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
4pc3_A_mol_pr    155 EAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERG    204

gb_AAN82549.1    251 IIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKRE    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
4pc3_A_mol_pr    205 IIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKRE    254

gb_AAN82549.1    301 EIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
4pc3_A_mol_pr    255 EIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRT    304

gb_AAN82549.1    351 TDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
4pc3_A_mol_pr    305 TDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVG    354

gb_AAN82549.1    401 AGVVAKVLG    409
                     |||||||||
4pc3_A_mol_pr    355 AGVVAKVLG    363


#---------------------------------------
#---------------------------------------